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- /*
- pybind11/numpy.h: Basic NumPy support, vectorize() wrapper
- Copyright (c) 2016 Wenzel Jakob <[email protected]>
- All rights reserved. Use of this source code is governed by a
- BSD-style license that can be found in the LICENSE file.
- */
- #pragma once
- #include "pybind11.h"
- #include "complex.h"
- #include <numeric>
- #include <algorithm>
- #include <array>
- #include <cstdint>
- #include <cstdlib>
- #include <cstring>
- #include <sstream>
- #include <string>
- #include <functional>
- #include <type_traits>
- #include <utility>
- #include <vector>
- #include <typeindex>
- #if defined(_MSC_VER)
- # pragma warning(push)
- # pragma warning(disable: 4127) // warning C4127: Conditional expression is constant
- #endif
- /* This will be true on all flat address space platforms and allows us to reduce the
- whole npy_intp / ssize_t / Py_intptr_t business down to just ssize_t for all size
- and dimension types (e.g. shape, strides, indexing), instead of inflicting this
- upon the library user. */
- static_assert(sizeof(::pybind11::ssize_t) == sizeof(Py_intptr_t), "ssize_t != Py_intptr_t");
- static_assert(std::is_signed<Py_intptr_t>::value, "Py_intptr_t must be signed");
- // We now can reinterpret_cast between py::ssize_t and Py_intptr_t (MSVC + PyPy cares)
- PYBIND11_NAMESPACE_BEGIN(PYBIND11_NAMESPACE)
- class array; // Forward declaration
- PYBIND11_NAMESPACE_BEGIN(detail)
- template <> struct handle_type_name<array> { static constexpr auto name = _("numpy.ndarray"); };
- template <typename type, typename SFINAE = void> struct npy_format_descriptor;
- struct PyArrayDescr_Proxy {
- PyObject_HEAD
- PyObject *typeobj;
- char kind;
- char type;
- char byteorder;
- char flags;
- int type_num;
- int elsize;
- int alignment;
- char *subarray;
- PyObject *fields;
- PyObject *names;
- };
- struct PyArray_Proxy {
- PyObject_HEAD
- char *data;
- int nd;
- ssize_t *dimensions;
- ssize_t *strides;
- PyObject *base;
- PyObject *descr;
- int flags;
- };
- struct PyVoidScalarObject_Proxy {
- PyObject_VAR_HEAD
- char *obval;
- PyArrayDescr_Proxy *descr;
- int flags;
- PyObject *base;
- };
- struct numpy_type_info {
- PyObject* dtype_ptr;
- std::string format_str;
- };
- struct numpy_internals {
- std::unordered_map<std::type_index, numpy_type_info> registered_dtypes;
- numpy_type_info *get_type_info(const std::type_info& tinfo, bool throw_if_missing = true) {
- auto it = registered_dtypes.find(std::type_index(tinfo));
- if (it != registered_dtypes.end())
- return &(it->second);
- if (throw_if_missing)
- pybind11_fail(std::string("NumPy type info missing for ") + tinfo.name());
- return nullptr;
- }
- template<typename T> numpy_type_info *get_type_info(bool throw_if_missing = true) {
- return get_type_info(typeid(typename std::remove_cv<T>::type), throw_if_missing);
- }
- };
- inline PYBIND11_NOINLINE void load_numpy_internals(numpy_internals* &ptr) {
- ptr = &get_or_create_shared_data<numpy_internals>("_numpy_internals");
- }
- inline numpy_internals& get_numpy_internals() {
- static numpy_internals* ptr = nullptr;
- if (!ptr)
- load_numpy_internals(ptr);
- return *ptr;
- }
- template <typename T> struct same_size {
- template <typename U> using as = bool_constant<sizeof(T) == sizeof(U)>;
- };
- template <typename Concrete> constexpr int platform_lookup() { return -1; }
- // Lookup a type according to its size, and return a value corresponding to the NumPy typenum.
- template <typename Concrete, typename T, typename... Ts, typename... Ints>
- constexpr int platform_lookup(int I, Ints... Is) {
- return sizeof(Concrete) == sizeof(T) ? I : platform_lookup<Concrete, Ts...>(Is...);
- }
- struct npy_api {
- enum constants {
- NPY_ARRAY_C_CONTIGUOUS_ = 0x0001,
- NPY_ARRAY_F_CONTIGUOUS_ = 0x0002,
- NPY_ARRAY_OWNDATA_ = 0x0004,
- NPY_ARRAY_FORCECAST_ = 0x0010,
- NPY_ARRAY_ENSUREARRAY_ = 0x0040,
- NPY_ARRAY_ALIGNED_ = 0x0100,
- NPY_ARRAY_WRITEABLE_ = 0x0400,
- NPY_BOOL_ = 0,
- NPY_BYTE_, NPY_UBYTE_,
- NPY_SHORT_, NPY_USHORT_,
- NPY_INT_, NPY_UINT_,
- NPY_LONG_, NPY_ULONG_,
- NPY_LONGLONG_, NPY_ULONGLONG_,
- NPY_FLOAT_, NPY_DOUBLE_, NPY_LONGDOUBLE_,
- NPY_CFLOAT_, NPY_CDOUBLE_, NPY_CLONGDOUBLE_,
- NPY_OBJECT_ = 17,
- NPY_STRING_, NPY_UNICODE_, NPY_VOID_,
- // Platform-dependent normalization
- NPY_INT8_ = NPY_BYTE_,
- NPY_UINT8_ = NPY_UBYTE_,
- NPY_INT16_ = NPY_SHORT_,
- NPY_UINT16_ = NPY_USHORT_,
- // `npy_common.h` defines the integer aliases. In order, it checks:
- // NPY_BITSOF_LONG, NPY_BITSOF_LONGLONG, NPY_BITSOF_INT, NPY_BITSOF_SHORT, NPY_BITSOF_CHAR
- // and assigns the alias to the first matching size, so we should check in this order.
- NPY_INT32_ = platform_lookup<std::int32_t, long, int, short>(
- NPY_LONG_, NPY_INT_, NPY_SHORT_),
- NPY_UINT32_ = platform_lookup<std::uint32_t, unsigned long, unsigned int, unsigned short>(
- NPY_ULONG_, NPY_UINT_, NPY_USHORT_),
- NPY_INT64_ = platform_lookup<std::int64_t, long, long long, int>(
- NPY_LONG_, NPY_LONGLONG_, NPY_INT_),
- NPY_UINT64_ = platform_lookup<std::uint64_t, unsigned long, unsigned long long, unsigned int>(
- NPY_ULONG_, NPY_ULONGLONG_, NPY_UINT_),
- };
- typedef struct {
- Py_intptr_t *ptr;
- int len;
- } PyArray_Dims;
- static npy_api& get() {
- static npy_api api = lookup();
- return api;
- }
- bool PyArray_Check_(PyObject *obj) const {
- return (bool) PyObject_TypeCheck(obj, PyArray_Type_);
- }
- bool PyArrayDescr_Check_(PyObject *obj) const {
- return (bool) PyObject_TypeCheck(obj, PyArrayDescr_Type_);
- }
- unsigned int (*PyArray_GetNDArrayCFeatureVersion_)();
- PyObject *(*PyArray_DescrFromType_)(int);
- PyObject *(*PyArray_NewFromDescr_)
- (PyTypeObject *, PyObject *, int, Py_intptr_t const *,
- Py_intptr_t const *, void *, int, PyObject *);
- // Unused. Not removed because that affects ABI of the class.
- PyObject *(*PyArray_DescrNewFromType_)(int);
- int (*PyArray_CopyInto_)(PyObject *, PyObject *);
- PyObject *(*PyArray_NewCopy_)(PyObject *, int);
- PyTypeObject *PyArray_Type_;
- PyTypeObject *PyVoidArrType_Type_;
- PyTypeObject *PyArrayDescr_Type_;
- PyObject *(*PyArray_DescrFromScalar_)(PyObject *);
- PyObject *(*PyArray_FromAny_) (PyObject *, PyObject *, int, int, int, PyObject *);
- int (*PyArray_DescrConverter_) (PyObject *, PyObject **);
- bool (*PyArray_EquivTypes_) (PyObject *, PyObject *);
- int (*PyArray_GetArrayParamsFromObject_)(PyObject *, PyObject *, unsigned char, PyObject **, int *,
- Py_intptr_t *, PyObject **, PyObject *);
- PyObject *(*PyArray_Squeeze_)(PyObject *);
- // Unused. Not removed because that affects ABI of the class.
- int (*PyArray_SetBaseObject_)(PyObject *, PyObject *);
- PyObject* (*PyArray_Resize_)(PyObject*, PyArray_Dims*, int, int);
- private:
- enum functions {
- API_PyArray_GetNDArrayCFeatureVersion = 211,
- API_PyArray_Type = 2,
- API_PyArrayDescr_Type = 3,
- API_PyVoidArrType_Type = 39,
- API_PyArray_DescrFromType = 45,
- API_PyArray_DescrFromScalar = 57,
- API_PyArray_FromAny = 69,
- API_PyArray_Resize = 80,
- API_PyArray_CopyInto = 82,
- API_PyArray_NewCopy = 85,
- API_PyArray_NewFromDescr = 94,
- API_PyArray_DescrNewFromType = 96,
- API_PyArray_DescrConverter = 174,
- API_PyArray_EquivTypes = 182,
- API_PyArray_GetArrayParamsFromObject = 278,
- API_PyArray_Squeeze = 136,
- API_PyArray_SetBaseObject = 282
- };
- static npy_api lookup() {
- module_ m = module_::import("numpy.core.multiarray");
- auto c = m.attr("_ARRAY_API");
- #if PY_MAJOR_VERSION >= 3
- void **api_ptr = (void **) PyCapsule_GetPointer(c.ptr(), NULL);
- #else
- void **api_ptr = (void **) PyCObject_AsVoidPtr(c.ptr());
- #endif
- npy_api api;
- #define DECL_NPY_API(Func) api.Func##_ = (decltype(api.Func##_)) api_ptr[API_##Func];
- DECL_NPY_API(PyArray_GetNDArrayCFeatureVersion);
- if (api.PyArray_GetNDArrayCFeatureVersion_() < 0x7)
- pybind11_fail("pybind11 numpy support requires numpy >= 1.7.0");
- DECL_NPY_API(PyArray_Type);
- DECL_NPY_API(PyVoidArrType_Type);
- DECL_NPY_API(PyArrayDescr_Type);
- DECL_NPY_API(PyArray_DescrFromType);
- DECL_NPY_API(PyArray_DescrFromScalar);
- DECL_NPY_API(PyArray_FromAny);
- DECL_NPY_API(PyArray_Resize);
- DECL_NPY_API(PyArray_CopyInto);
- DECL_NPY_API(PyArray_NewCopy);
- DECL_NPY_API(PyArray_NewFromDescr);
- DECL_NPY_API(PyArray_DescrNewFromType);
- DECL_NPY_API(PyArray_DescrConverter);
- DECL_NPY_API(PyArray_EquivTypes);
- DECL_NPY_API(PyArray_GetArrayParamsFromObject);
- DECL_NPY_API(PyArray_Squeeze);
- DECL_NPY_API(PyArray_SetBaseObject);
- #undef DECL_NPY_API
- return api;
- }
- };
- inline PyArray_Proxy* array_proxy(void* ptr) {
- return reinterpret_cast<PyArray_Proxy*>(ptr);
- }
- inline const PyArray_Proxy* array_proxy(const void* ptr) {
- return reinterpret_cast<const PyArray_Proxy*>(ptr);
- }
- inline PyArrayDescr_Proxy* array_descriptor_proxy(PyObject* ptr) {
- return reinterpret_cast<PyArrayDescr_Proxy*>(ptr);
- }
- inline const PyArrayDescr_Proxy* array_descriptor_proxy(const PyObject* ptr) {
- return reinterpret_cast<const PyArrayDescr_Proxy*>(ptr);
- }
- inline bool check_flags(const void* ptr, int flag) {
- return (flag == (array_proxy(ptr)->flags & flag));
- }
- template <typename T> struct is_std_array : std::false_type { };
- template <typename T, size_t N> struct is_std_array<std::array<T, N>> : std::true_type { };
- template <typename T> struct is_complex : std::false_type { };
- template <typename T> struct is_complex<std::complex<T>> : std::true_type { };
- template <typename T> struct array_info_scalar {
- using type = T;
- static constexpr bool is_array = false;
- static constexpr bool is_empty = false;
- static constexpr auto extents = _("");
- static void append_extents(list& /* shape */) { }
- };
- // Computes underlying type and a comma-separated list of extents for array
- // types (any mix of std::array and built-in arrays). An array of char is
- // treated as scalar because it gets special handling.
- template <typename T> struct array_info : array_info_scalar<T> { };
- template <typename T, size_t N> struct array_info<std::array<T, N>> {
- using type = typename array_info<T>::type;
- static constexpr bool is_array = true;
- static constexpr bool is_empty = (N == 0) || array_info<T>::is_empty;
- static constexpr size_t extent = N;
- // appends the extents to shape
- static void append_extents(list& shape) {
- shape.append(N);
- array_info<T>::append_extents(shape);
- }
- static constexpr auto extents = _<array_info<T>::is_array>(
- concat(_<N>(), array_info<T>::extents), _<N>()
- );
- };
- // For numpy we have special handling for arrays of characters, so we don't include
- // the size in the array extents.
- template <size_t N> struct array_info<char[N]> : array_info_scalar<char[N]> { };
- template <size_t N> struct array_info<std::array<char, N>> : array_info_scalar<std::array<char, N>> { };
- template <typename T, size_t N> struct array_info<T[N]> : array_info<std::array<T, N>> { };
- template <typename T> using remove_all_extents_t = typename array_info<T>::type;
- template <typename T> using is_pod_struct = all_of<
- std::is_standard_layout<T>, // since we're accessing directly in memory we need a standard layout type
- #if !defined(__GNUG__) || defined(_LIBCPP_VERSION) || defined(_GLIBCXX_USE_CXX11_ABI)
- // _GLIBCXX_USE_CXX11_ABI indicates that we're using libstdc++ from GCC 5 or newer, independent
- // of the actual compiler (Clang can also use libstdc++, but it always defines __GNUC__ == 4).
- std::is_trivially_copyable<T>,
- #else
- // GCC 4 doesn't implement is_trivially_copyable, so approximate it
- std::is_trivially_destructible<T>,
- satisfies_any_of<T, std::has_trivial_copy_constructor, std::has_trivial_copy_assign>,
- #endif
- satisfies_none_of<T, std::is_reference, std::is_array, is_std_array, std::is_arithmetic, is_complex, std::is_enum>
- >;
- // Replacement for std::is_pod (deprecated in C++20)
- template <typename T> using is_pod = all_of<
- std::is_standard_layout<T>,
- std::is_trivial<T>
- >;
- template <ssize_t Dim = 0, typename Strides> ssize_t byte_offset_unsafe(const Strides &) { return 0; }
- template <ssize_t Dim = 0, typename Strides, typename... Ix>
- ssize_t byte_offset_unsafe(const Strides &strides, ssize_t i, Ix... index) {
- return i * strides[Dim] + byte_offset_unsafe<Dim + 1>(strides, index...);
- }
- /**
- * Proxy class providing unsafe, unchecked const access to array data. This is constructed through
- * the `unchecked<T, N>()` method of `array` or the `unchecked<N>()` method of `array_t<T>`. `Dims`
- * will be -1 for dimensions determined at runtime.
- */
- template <typename T, ssize_t Dims>
- class unchecked_reference {
- protected:
- static constexpr bool Dynamic = Dims < 0;
- const unsigned char *data_;
- // Storing the shape & strides in local variables (i.e. these arrays) allows the compiler to
- // make large performance gains on big, nested loops, but requires compile-time dimensions
- conditional_t<Dynamic, const ssize_t *, std::array<ssize_t, (size_t) Dims>>
- shape_, strides_;
- const ssize_t dims_;
- friend class pybind11::array;
- // Constructor for compile-time dimensions:
- template <bool Dyn = Dynamic>
- unchecked_reference(const void *data, const ssize_t *shape, const ssize_t *strides, enable_if_t<!Dyn, ssize_t>)
- : data_{reinterpret_cast<const unsigned char *>(data)}, dims_{Dims} {
- for (size_t i = 0; i < (size_t) dims_; i++) {
- shape_[i] = shape[i];
- strides_[i] = strides[i];
- }
- }
- // Constructor for runtime dimensions:
- template <bool Dyn = Dynamic>
- unchecked_reference(const void *data, const ssize_t *shape, const ssize_t *strides, enable_if_t<Dyn, ssize_t> dims)
- : data_{reinterpret_cast<const unsigned char *>(data)}, shape_{shape}, strides_{strides}, dims_{dims} {}
- public:
- /**
- * Unchecked const reference access to data at the given indices. For a compile-time known
- * number of dimensions, this requires the correct number of arguments; for run-time
- * dimensionality, this is not checked (and so is up to the caller to use safely).
- */
- template <typename... Ix> const T &operator()(Ix... index) const {
- static_assert(ssize_t{sizeof...(Ix)} == Dims || Dynamic,
- "Invalid number of indices for unchecked array reference");
- return *reinterpret_cast<const T *>(data_ + byte_offset_unsafe(strides_, ssize_t(index)...));
- }
- /**
- * Unchecked const reference access to data; this operator only participates if the reference
- * is to a 1-dimensional array. When present, this is exactly equivalent to `obj(index)`.
- */
- template <ssize_t D = Dims, typename = enable_if_t<D == 1 || Dynamic>>
- const T &operator[](ssize_t index) const { return operator()(index); }
- /// Pointer access to the data at the given indices.
- template <typename... Ix> const T *data(Ix... ix) const { return &operator()(ssize_t(ix)...); }
- /// Returns the item size, i.e. sizeof(T)
- constexpr static ssize_t itemsize() { return sizeof(T); }
- /// Returns the shape (i.e. size) of dimension `dim`
- ssize_t shape(ssize_t dim) const { return shape_[(size_t) dim]; }
- /// Returns the number of dimensions of the array
- ssize_t ndim() const { return dims_; }
- /// Returns the total number of elements in the referenced array, i.e. the product of the shapes
- template <bool Dyn = Dynamic>
- enable_if_t<!Dyn, ssize_t> size() const {
- return std::accumulate(shape_.begin(), shape_.end(), (ssize_t) 1, std::multiplies<ssize_t>());
- }
- template <bool Dyn = Dynamic>
- enable_if_t<Dyn, ssize_t> size() const {
- return std::accumulate(shape_, shape_ + ndim(), (ssize_t) 1, std::multiplies<ssize_t>());
- }
- /// Returns the total number of bytes used by the referenced data. Note that the actual span in
- /// memory may be larger if the referenced array has non-contiguous strides (e.g. for a slice).
- ssize_t nbytes() const {
- return size() * itemsize();
- }
- };
- template <typename T, ssize_t Dims>
- class unchecked_mutable_reference : public unchecked_reference<T, Dims> {
- friend class pybind11::array;
- using ConstBase = unchecked_reference<T, Dims>;
- using ConstBase::ConstBase;
- using ConstBase::Dynamic;
- public:
- // Bring in const-qualified versions from base class
- using ConstBase::operator();
- using ConstBase::operator[];
- /// Mutable, unchecked access to data at the given indices.
- template <typename... Ix> T& operator()(Ix... index) {
- static_assert(ssize_t{sizeof...(Ix)} == Dims || Dynamic,
- "Invalid number of indices for unchecked array reference");
- return const_cast<T &>(ConstBase::operator()(index...));
- }
- /**
- * Mutable, unchecked access data at the given index; this operator only participates if the
- * reference is to a 1-dimensional array (or has runtime dimensions). When present, this is
- * exactly equivalent to `obj(index)`.
- */
- template <ssize_t D = Dims, typename = enable_if_t<D == 1 || Dynamic>>
- T &operator[](ssize_t index) { return operator()(index); }
- /// Mutable pointer access to the data at the given indices.
- template <typename... Ix> T *mutable_data(Ix... ix) { return &operator()(ssize_t(ix)...); }
- };
- template <typename T, ssize_t Dim>
- struct type_caster<unchecked_reference<T, Dim>> {
- static_assert(Dim == 0 && Dim > 0 /* always fail */, "unchecked array proxy object is not castable");
- };
- template <typename T, ssize_t Dim>
- struct type_caster<unchecked_mutable_reference<T, Dim>> : type_caster<unchecked_reference<T, Dim>> {};
- PYBIND11_NAMESPACE_END(detail)
- class dtype : public object {
- public:
- PYBIND11_OBJECT_DEFAULT(dtype, object, detail::npy_api::get().PyArrayDescr_Check_);
- explicit dtype(const buffer_info &info) {
- dtype descr(_dtype_from_pep3118()(PYBIND11_STR_TYPE(info.format)));
- // If info.itemsize == 0, use the value calculated from the format string
- m_ptr = descr.strip_padding(info.itemsize ? info.itemsize : descr.itemsize()).release().ptr();
- }
- explicit dtype(const std::string &format) {
- m_ptr = from_args(pybind11::str(format)).release().ptr();
- }
- dtype(const char *format) : dtype(std::string(format)) { }
- dtype(list names, list formats, list offsets, ssize_t itemsize) {
- dict args;
- args["names"] = names;
- args["formats"] = formats;
- args["offsets"] = offsets;
- args["itemsize"] = pybind11::int_(itemsize);
- m_ptr = from_args(args).release().ptr();
- }
- /// This is essentially the same as calling numpy.dtype(args) in Python.
- static dtype from_args(object args) {
- PyObject *ptr = nullptr;
- if (!detail::npy_api::get().PyArray_DescrConverter_(args.ptr(), &ptr) || !ptr)
- throw error_already_set();
- return reinterpret_steal<dtype>(ptr);
- }
- /// Return dtype associated with a C++ type.
- template <typename T> static dtype of() {
- return detail::npy_format_descriptor<typename std::remove_cv<T>::type>::dtype();
- }
- /// Size of the data type in bytes.
- ssize_t itemsize() const {
- return detail::array_descriptor_proxy(m_ptr)->elsize;
- }
- /// Returns true for structured data types.
- bool has_fields() const {
- return detail::array_descriptor_proxy(m_ptr)->names != nullptr;
- }
- /// Single-character type code.
- char kind() const {
- return detail::array_descriptor_proxy(m_ptr)->kind;
- }
- private:
- static object _dtype_from_pep3118() {
- static PyObject *obj = module_::import("numpy.core._internal")
- .attr("_dtype_from_pep3118").cast<object>().release().ptr();
- return reinterpret_borrow<object>(obj);
- }
- dtype strip_padding(ssize_t itemsize) {
- // Recursively strip all void fields with empty names that are generated for
- // padding fields (as of NumPy v1.11).
- if (!has_fields())
- return *this;
- struct field_descr { PYBIND11_STR_TYPE name; object format; pybind11::int_ offset; };
- std::vector<field_descr> field_descriptors;
- for (auto field : attr("fields").attr("items")()) {
- auto spec = field.cast<tuple>();
- auto name = spec[0].cast<pybind11::str>();
- auto format = spec[1].cast<tuple>()[0].cast<dtype>();
- auto offset = spec[1].cast<tuple>()[1].cast<pybind11::int_>();
- if (!len(name) && format.kind() == 'V')
- continue;
- field_descriptors.push_back({(PYBIND11_STR_TYPE) name, format.strip_padding(format.itemsize()), offset});
- }
- std::sort(field_descriptors.begin(), field_descriptors.end(),
- [](const field_descr& a, const field_descr& b) {
- return a.offset.cast<int>() < b.offset.cast<int>();
- });
- list names, formats, offsets;
- for (auto& descr : field_descriptors) {
- names.append(descr.name);
- formats.append(descr.format);
- offsets.append(descr.offset);
- }
- return dtype(names, formats, offsets, itemsize);
- }
- };
- class array : public buffer {
- public:
- PYBIND11_OBJECT_CVT(array, buffer, detail::npy_api::get().PyArray_Check_, raw_array)
- enum {
- c_style = detail::npy_api::NPY_ARRAY_C_CONTIGUOUS_,
- f_style = detail::npy_api::NPY_ARRAY_F_CONTIGUOUS_,
- forcecast = detail::npy_api::NPY_ARRAY_FORCECAST_
- };
- array() : array(0, static_cast<const double *>(nullptr)) {}
- using ShapeContainer = detail::any_container<ssize_t>;
- using StridesContainer = detail::any_container<ssize_t>;
- // Constructs an array taking shape/strides from arbitrary container types
- array(const pybind11::dtype &dt, ShapeContainer shape, StridesContainer strides,
- const void *ptr = nullptr, handle base = handle()) {
- if (strides->empty())
- *strides = detail::c_strides(*shape, dt.itemsize());
- auto ndim = shape->size();
- if (ndim != strides->size())
- pybind11_fail("NumPy: shape ndim doesn't match strides ndim");
- auto descr = dt;
- int flags = 0;
- if (base && ptr) {
- if (isinstance<array>(base))
- /* Copy flags from base (except ownership bit) */
- flags = reinterpret_borrow<array>(base).flags() & ~detail::npy_api::NPY_ARRAY_OWNDATA_;
- else
- /* Writable by default, easy to downgrade later on if needed */
- flags = detail::npy_api::NPY_ARRAY_WRITEABLE_;
- }
- auto &api = detail::npy_api::get();
- auto tmp = reinterpret_steal<object>(api.PyArray_NewFromDescr_(
- api.PyArray_Type_, descr.release().ptr(), (int) ndim,
- // Use reinterpret_cast for PyPy on Windows (remove if fixed, checked on 7.3.1)
- reinterpret_cast<Py_intptr_t*>(shape->data()),
- reinterpret_cast<Py_intptr_t*>(strides->data()),
- const_cast<void *>(ptr), flags, nullptr));
- if (!tmp)
- throw error_already_set();
- if (ptr) {
- if (base) {
- api.PyArray_SetBaseObject_(tmp.ptr(), base.inc_ref().ptr());
- } else {
- tmp = reinterpret_steal<object>(api.PyArray_NewCopy_(tmp.ptr(), -1 /* any order */));
- }
- }
- m_ptr = tmp.release().ptr();
- }
- array(const pybind11::dtype &dt, ShapeContainer shape, const void *ptr = nullptr, handle base = handle())
- : array(dt, std::move(shape), {}, ptr, base) { }
- template <typename T, typename = detail::enable_if_t<std::is_integral<T>::value && !std::is_same<bool, T>::value>>
- array(const pybind11::dtype &dt, T count, const void *ptr = nullptr, handle base = handle())
- : array(dt, {{count}}, ptr, base) { }
- template <typename T>
- array(ShapeContainer shape, StridesContainer strides, const T *ptr, handle base = handle())
- : array(pybind11::dtype::of<T>(), std::move(shape), std::move(strides), ptr, base) { }
- template <typename T>
- array(ShapeContainer shape, const T *ptr, handle base = handle())
- : array(std::move(shape), {}, ptr, base) { }
- template <typename T>
- explicit array(ssize_t count, const T *ptr, handle base = handle()) : array({count}, {}, ptr, base) { }
- explicit array(const buffer_info &info, handle base = handle())
- : array(pybind11::dtype(info), info.shape, info.strides, info.ptr, base) { }
- /// Array descriptor (dtype)
- pybind11::dtype dtype() const {
- return reinterpret_borrow<pybind11::dtype>(detail::array_proxy(m_ptr)->descr);
- }
- /// Total number of elements
- ssize_t size() const {
- return std::accumulate(shape(), shape() + ndim(), (ssize_t) 1, std::multiplies<ssize_t>());
- }
- /// Byte size of a single element
- ssize_t itemsize() const {
- return detail::array_descriptor_proxy(detail::array_proxy(m_ptr)->descr)->elsize;
- }
- /// Total number of bytes
- ssize_t nbytes() const {
- return size() * itemsize();
- }
- /// Number of dimensions
- ssize_t ndim() const {
- return detail::array_proxy(m_ptr)->nd;
- }
- /// Base object
- object base() const {
- return reinterpret_borrow<object>(detail::array_proxy(m_ptr)->base);
- }
- /// Dimensions of the array
- const ssize_t* shape() const {
- return detail::array_proxy(m_ptr)->dimensions;
- }
- /// Dimension along a given axis
- ssize_t shape(ssize_t dim) const {
- if (dim >= ndim())
- fail_dim_check(dim, "invalid axis");
- return shape()[dim];
- }
- /// Strides of the array
- const ssize_t* strides() const {
- return detail::array_proxy(m_ptr)->strides;
- }
- /// Stride along a given axis
- ssize_t strides(ssize_t dim) const {
- if (dim >= ndim())
- fail_dim_check(dim, "invalid axis");
- return strides()[dim];
- }
- /// Return the NumPy array flags
- int flags() const {
- return detail::array_proxy(m_ptr)->flags;
- }
- /// If set, the array is writeable (otherwise the buffer is read-only)
- bool writeable() const {
- return detail::check_flags(m_ptr, detail::npy_api::NPY_ARRAY_WRITEABLE_);
- }
- /// If set, the array owns the data (will be freed when the array is deleted)
- bool owndata() const {
- return detail::check_flags(m_ptr, detail::npy_api::NPY_ARRAY_OWNDATA_);
- }
- /// Pointer to the contained data. If index is not provided, points to the
- /// beginning of the buffer. May throw if the index would lead to out of bounds access.
- template<typename... Ix> const void* data(Ix... index) const {
- return static_cast<const void *>(detail::array_proxy(m_ptr)->data + offset_at(index...));
- }
- /// Mutable pointer to the contained data. If index is not provided, points to the
- /// beginning of the buffer. May throw if the index would lead to out of bounds access.
- /// May throw if the array is not writeable.
- template<typename... Ix> void* mutable_data(Ix... index) {
- check_writeable();
- return static_cast<void *>(detail::array_proxy(m_ptr)->data + offset_at(index...));
- }
- /// Byte offset from beginning of the array to a given index (full or partial).
- /// May throw if the index would lead to out of bounds access.
- template<typename... Ix> ssize_t offset_at(Ix... index) const {
- if ((ssize_t) sizeof...(index) > ndim())
- fail_dim_check(sizeof...(index), "too many indices for an array");
- return byte_offset(ssize_t(index)...);
- }
- ssize_t offset_at() const { return 0; }
- /// Item count from beginning of the array to a given index (full or partial).
- /// May throw if the index would lead to out of bounds access.
- template<typename... Ix> ssize_t index_at(Ix... index) const {
- return offset_at(index...) / itemsize();
- }
- /**
- * Returns a proxy object that provides access to the array's data without bounds or
- * dimensionality checking. Will throw if the array is missing the `writeable` flag. Use with
- * care: the array must not be destroyed or reshaped for the duration of the returned object,
- * and the caller must take care not to access invalid dimensions or dimension indices.
- */
- template <typename T, ssize_t Dims = -1> detail::unchecked_mutable_reference<T, Dims> mutable_unchecked() & {
- if (Dims >= 0 && ndim() != Dims)
- throw std::domain_error("array has incorrect number of dimensions: " + std::to_string(ndim()) +
- "; expected " + std::to_string(Dims));
- return detail::unchecked_mutable_reference<T, Dims>(mutable_data(), shape(), strides(), ndim());
- }
- /**
- * Returns a proxy object that provides const access to the array's data without bounds or
- * dimensionality checking. Unlike `mutable_unchecked()`, this does not require that the
- * underlying array have the `writable` flag. Use with care: the array must not be destroyed or
- * reshaped for the duration of the returned object, and the caller must take care not to access
- * invalid dimensions or dimension indices.
- */
- template <typename T, ssize_t Dims = -1> detail::unchecked_reference<T, Dims> unchecked() const & {
- if (Dims >= 0 && ndim() != Dims)
- throw std::domain_error("array has incorrect number of dimensions: " + std::to_string(ndim()) +
- "; expected " + std::to_string(Dims));
- return detail::unchecked_reference<T, Dims>(data(), shape(), strides(), ndim());
- }
- /// Return a new view with all of the dimensions of length 1 removed
- array squeeze() {
- auto& api = detail::npy_api::get();
- return reinterpret_steal<array>(api.PyArray_Squeeze_(m_ptr));
- }
- /// Resize array to given shape
- /// If refcheck is true and more that one reference exist to this array
- /// then resize will succeed only if it makes a reshape, i.e. original size doesn't change
- void resize(ShapeContainer new_shape, bool refcheck = true) {
- detail::npy_api::PyArray_Dims d = {
- // Use reinterpret_cast for PyPy on Windows (remove if fixed, checked on 7.3.1)
- reinterpret_cast<Py_intptr_t*>(new_shape->data()),
- int(new_shape->size())
- };
- // try to resize, set ordering param to -1 cause it's not used anyway
- auto new_array = reinterpret_steal<object>(
- detail::npy_api::get().PyArray_Resize_(m_ptr, &d, int(refcheck), -1)
- );
- if (!new_array) throw error_already_set();
- if (isinstance<array>(new_array)) { *this = std::move(new_array); }
- }
- /// Ensure that the argument is a NumPy array
- /// In case of an error, nullptr is returned and the Python error is cleared.
- static array ensure(handle h, int ExtraFlags = 0) {
- auto result = reinterpret_steal<array>(raw_array(h.ptr(), ExtraFlags));
- if (!result)
- PyErr_Clear();
- return result;
- }
- protected:
- template<typename, typename> friend struct detail::npy_format_descriptor;
- void fail_dim_check(ssize_t dim, const std::string& msg) const {
- throw index_error(msg + ": " + std::to_string(dim) +
- " (ndim = " + std::to_string(ndim()) + ")");
- }
- template<typename... Ix> ssize_t byte_offset(Ix... index) const {
- check_dimensions(index...);
- return detail::byte_offset_unsafe(strides(), ssize_t(index)...);
- }
- void check_writeable() const {
- if (!writeable())
- throw std::domain_error("array is not writeable");
- }
- template<typename... Ix> void check_dimensions(Ix... index) const {
- check_dimensions_impl(ssize_t(0), shape(), ssize_t(index)...);
- }
- void check_dimensions_impl(ssize_t, const ssize_t*) const { }
- template<typename... Ix> void check_dimensions_impl(ssize_t axis, const ssize_t* shape, ssize_t i, Ix... index) const {
- if (i >= *shape) {
- throw index_error(std::string("index ") + std::to_string(i) +
- " is out of bounds for axis " + std::to_string(axis) +
- " with size " + std::to_string(*shape));
- }
- check_dimensions_impl(axis + 1, shape + 1, index...);
- }
- /// Create array from any object -- always returns a new reference
- static PyObject *raw_array(PyObject *ptr, int ExtraFlags = 0) {
- if (ptr == nullptr) {
- PyErr_SetString(PyExc_ValueError, "cannot create a pybind11::array from a nullptr");
- return nullptr;
- }
- return detail::npy_api::get().PyArray_FromAny_(
- ptr, nullptr, 0, 0, detail::npy_api::NPY_ARRAY_ENSUREARRAY_ | ExtraFlags, nullptr);
- }
- };
- template <typename T, int ExtraFlags = array::forcecast> class array_t : public array {
- private:
- struct private_ctor {};
- // Delegating constructor needed when both moving and accessing in the same constructor
- array_t(private_ctor, ShapeContainer &&shape, StridesContainer &&strides, const T *ptr, handle base)
- : array(std::move(shape), std::move(strides), ptr, base) {}
- public:
- static_assert(!detail::array_info<T>::is_array, "Array types cannot be used with array_t");
- using value_type = T;
- array_t() : array(0, static_cast<const T *>(nullptr)) {}
- array_t(handle h, borrowed_t) : array(h, borrowed_t{}) { }
- array_t(handle h, stolen_t) : array(h, stolen_t{}) { }
- PYBIND11_DEPRECATED("Use array_t<T>::ensure() instead")
- array_t(handle h, bool is_borrowed) : array(raw_array_t(h.ptr()), stolen_t{}) {
- if (!m_ptr) PyErr_Clear();
- if (!is_borrowed) Py_XDECREF(h.ptr());
- }
- array_t(const object &o) : array(raw_array_t(o.ptr()), stolen_t{}) {
- if (!m_ptr) throw error_already_set();
- }
- explicit array_t(const buffer_info& info, handle base = handle()) : array(info, base) { }
- array_t(ShapeContainer shape, StridesContainer strides, const T *ptr = nullptr, handle base = handle())
- : array(std::move(shape), std::move(strides), ptr, base) { }
- explicit array_t(ShapeContainer shape, const T *ptr = nullptr, handle base = handle())
- : array_t(private_ctor{}, std::move(shape),
- ExtraFlags & f_style
- ? detail::f_strides(*shape, itemsize())
- : detail::c_strides(*shape, itemsize()),
- ptr, base) { }
- explicit array_t(ssize_t count, const T *ptr = nullptr, handle base = handle())
- : array({count}, {}, ptr, base) { }
- constexpr ssize_t itemsize() const {
- return sizeof(T);
- }
- template<typename... Ix> ssize_t index_at(Ix... index) const {
- return offset_at(index...) / itemsize();
- }
- template<typename... Ix> const T* data(Ix... index) const {
- return static_cast<const T*>(array::data(index...));
- }
- template<typename... Ix> T* mutable_data(Ix... index) {
- return static_cast<T*>(array::mutable_data(index...));
- }
- // Reference to element at a given index
- template<typename... Ix> const T& at(Ix... index) const {
- if ((ssize_t) sizeof...(index) != ndim())
- fail_dim_check(sizeof...(index), "index dimension mismatch");
- return *(static_cast<const T*>(array::data()) + byte_offset(ssize_t(index)...) / itemsize());
- }
- // Mutable reference to element at a given index
- template<typename... Ix> T& mutable_at(Ix... index) {
- if ((ssize_t) sizeof...(index) != ndim())
- fail_dim_check(sizeof...(index), "index dimension mismatch");
- return *(static_cast<T*>(array::mutable_data()) + byte_offset(ssize_t(index)...) / itemsize());
- }
- /**
- * Returns a proxy object that provides access to the array's data without bounds or
- * dimensionality checking. Will throw if the array is missing the `writeable` flag. Use with
- * care: the array must not be destroyed or reshaped for the duration of the returned object,
- * and the caller must take care not to access invalid dimensions or dimension indices.
- */
- template <ssize_t Dims = -1> detail::unchecked_mutable_reference<T, Dims> mutable_unchecked() & {
- return array::mutable_unchecked<T, Dims>();
- }
- /**
- * Returns a proxy object that provides const access to the array's data without bounds or
- * dimensionality checking. Unlike `unchecked()`, this does not require that the underlying
- * array have the `writable` flag. Use with care: the array must not be destroyed or reshaped
- * for the duration of the returned object, and the caller must take care not to access invalid
- * dimensions or dimension indices.
- */
- template <ssize_t Dims = -1> detail::unchecked_reference<T, Dims> unchecked() const & {
- return array::unchecked<T, Dims>();
- }
- /// Ensure that the argument is a NumPy array of the correct dtype (and if not, try to convert
- /// it). In case of an error, nullptr is returned and the Python error is cleared.
- static array_t ensure(handle h) {
- auto result = reinterpret_steal<array_t>(raw_array_t(h.ptr()));
- if (!result)
- PyErr_Clear();
- return result;
- }
- static bool check_(handle h) {
- const auto &api = detail::npy_api::get();
- return api.PyArray_Check_(h.ptr())
- && api.PyArray_EquivTypes_(detail::array_proxy(h.ptr())->descr, dtype::of<T>().ptr())
- && detail::check_flags(h.ptr(), ExtraFlags & (array::c_style | array::f_style));
- }
- protected:
- /// Create array from any object -- always returns a new reference
- static PyObject *raw_array_t(PyObject *ptr) {
- if (ptr == nullptr) {
- PyErr_SetString(PyExc_ValueError, "cannot create a pybind11::array_t from a nullptr");
- return nullptr;
- }
- return detail::npy_api::get().PyArray_FromAny_(
- ptr, dtype::of<T>().release().ptr(), 0, 0,
- detail::npy_api::NPY_ARRAY_ENSUREARRAY_ | ExtraFlags, nullptr);
- }
- };
- template <typename T>
- struct format_descriptor<T, detail::enable_if_t<detail::is_pod_struct<T>::value>> {
- static std::string format() {
- return detail::npy_format_descriptor<typename std::remove_cv<T>::type>::format();
- }
- };
- template <size_t N> struct format_descriptor<char[N]> {
- static std::string format() { return std::to_string(N) + "s"; }
- };
- template <size_t N> struct format_descriptor<std::array<char, N>> {
- static std::string format() { return std::to_string(N) + "s"; }
- };
- template <typename T>
- struct format_descriptor<T, detail::enable_if_t<std::is_enum<T>::value>> {
- static std::string format() {
- return format_descriptor<
- typename std::remove_cv<typename std::underlying_type<T>::type>::type>::format();
- }
- };
- template <typename T>
- struct format_descriptor<T, detail::enable_if_t<detail::array_info<T>::is_array>> {
- static std::string format() {
- using namespace detail;
- static constexpr auto extents = _("(") + array_info<T>::extents + _(")");
- return extents.text + format_descriptor<remove_all_extents_t<T>>::format();
- }
- };
- PYBIND11_NAMESPACE_BEGIN(detail)
- template <typename T, int ExtraFlags>
- struct pyobject_caster<array_t<T, ExtraFlags>> {
- using type = array_t<T, ExtraFlags>;
- bool load(handle src, bool convert) {
- if (!convert && !type::check_(src))
- return false;
- value = type::ensure(src);
- return static_cast<bool>(value);
- }
- static handle cast(const handle &src, return_value_policy /* policy */, handle /* parent */) {
- return src.inc_ref();
- }
- PYBIND11_TYPE_CASTER(type, handle_type_name<type>::name);
- };
- template <typename T>
- struct compare_buffer_info<T, detail::enable_if_t<detail::is_pod_struct<T>::value>> {
- static bool compare(const buffer_info& b) {
- return npy_api::get().PyArray_EquivTypes_(dtype::of<T>().ptr(), dtype(b).ptr());
- }
- };
- template <typename T, typename = void>
- struct npy_format_descriptor_name;
- template <typename T>
- struct npy_format_descriptor_name<T, enable_if_t<std::is_integral<T>::value>> {
- static constexpr auto name = _<std::is_same<T, bool>::value>(
- _("bool"), _<std::is_signed<T>::value>("numpy.int", "numpy.uint") + _<sizeof(T)*8>()
- );
- };
- template <typename T>
- struct npy_format_descriptor_name<T, enable_if_t<std::is_floating_point<T>::value>> {
- static constexpr auto name = _<std::is_same<T, float>::value || std::is_same<T, double>::value>(
- _("numpy.float") + _<sizeof(T)*8>(), _("numpy.longdouble")
- );
- };
- template <typename T>
- struct npy_format_descriptor_name<T, enable_if_t<is_complex<T>::value>> {
- static constexpr auto name = _<std::is_same<typename T::value_type, float>::value
- || std::is_same<typename T::value_type, double>::value>(
- _("numpy.complex") + _<sizeof(typename T::value_type)*16>(), _("numpy.longcomplex")
- );
- };
- template <typename T>
- struct npy_format_descriptor<T, enable_if_t<satisfies_any_of<T, std::is_arithmetic, is_complex>::value>>
- : npy_format_descriptor_name<T> {
- private:
- // NB: the order here must match the one in common.h
- constexpr static const int values[15] = {
- npy_api::NPY_BOOL_,
- npy_api::NPY_BYTE_, npy_api::NPY_UBYTE_, npy_api::NPY_INT16_, npy_api::NPY_UINT16_,
- npy_api::NPY_INT32_, npy_api::NPY_UINT32_, npy_api::NPY_INT64_, npy_api::NPY_UINT64_,
- npy_api::NPY_FLOAT_, npy_api::NPY_DOUBLE_, npy_api::NPY_LONGDOUBLE_,
- npy_api::NPY_CFLOAT_, npy_api::NPY_CDOUBLE_, npy_api::NPY_CLONGDOUBLE_
- };
- public:
- static constexpr int value = values[detail::is_fmt_numeric<T>::index];
- static pybind11::dtype dtype() {
- if (auto ptr = npy_api::get().PyArray_DescrFromType_(value))
- return reinterpret_steal<pybind11::dtype>(ptr);
- pybind11_fail("Unsupported buffer format!");
- }
- };
- #define PYBIND11_DECL_CHAR_FMT \
- static constexpr auto name = _("S") + _<N>(); \
- static pybind11::dtype dtype() { return pybind11::dtype(std::string("S") + std::to_string(N)); }
- template <size_t N> struct npy_format_descriptor<char[N]> { PYBIND11_DECL_CHAR_FMT };
- template <size_t N> struct npy_format_descriptor<std::array<char, N>> { PYBIND11_DECL_CHAR_FMT };
- #undef PYBIND11_DECL_CHAR_FMT
- template<typename T> struct npy_format_descriptor<T, enable_if_t<array_info<T>::is_array>> {
- private:
- using base_descr = npy_format_descriptor<typename array_info<T>::type>;
- public:
- static_assert(!array_info<T>::is_empty, "Zero-sized arrays are not supported");
- static constexpr auto name = _("(") + array_info<T>::extents + _(")") + base_descr::name;
- static pybind11::dtype dtype() {
- list shape;
- array_info<T>::append_extents(shape);
- return pybind11::dtype::from_args(pybind11::make_tuple(base_descr::dtype(), shape));
- }
- };
- template<typename T> struct npy_format_descriptor<T, enable_if_t<std::is_enum<T>::value>> {
- private:
- using base_descr = npy_format_descriptor<typename std::underlying_type<T>::type>;
- public:
- static constexpr auto name = base_descr::name;
- static pybind11::dtype dtype() { return base_descr::dtype(); }
- };
- struct field_descriptor {
- const char *name;
- ssize_t offset;
- ssize_t size;
- std::string format;
- dtype descr;
- };
- inline PYBIND11_NOINLINE void register_structured_dtype(
- any_container<field_descriptor> fields,
- const std::type_info& tinfo, ssize_t itemsize,
- bool (*direct_converter)(PyObject *, void *&)) {
- auto& numpy_internals = get_numpy_internals();
- if (numpy_internals.get_type_info(tinfo, false))
- pybind11_fail("NumPy: dtype is already registered");
- // Use ordered fields because order matters as of NumPy 1.14:
- // https://docs.scipy.org/doc/numpy/release.html#multiple-field-indexing-assignment-of-structured-arrays
- std::vector<field_descriptor> ordered_fields(std::move(fields));
- std::sort(ordered_fields.begin(), ordered_fields.end(),
- [](const field_descriptor &a, const field_descriptor &b) { return a.offset < b.offset; });
- list names, formats, offsets;
- for (auto& field : ordered_fields) {
- if (!field.descr)
- pybind11_fail(std::string("NumPy: unsupported field dtype: `") +
- field.name + "` @ " + tinfo.name());
- names.append(PYBIND11_STR_TYPE(field.name));
- formats.append(field.descr);
- offsets.append(pybind11::int_(field.offset));
- }
- auto dtype_ptr = pybind11::dtype(names, formats, offsets, itemsize).release().ptr();
- // There is an existing bug in NumPy (as of v1.11): trailing bytes are
- // not encoded explicitly into the format string. This will supposedly
- // get fixed in v1.12; for further details, see these:
- // - https://github.com/numpy/numpy/issues/7797
- // - https://github.com/numpy/numpy/pull/7798
- // Because of this, we won't use numpy's logic to generate buffer format
- // strings and will just do it ourselves.
- ssize_t offset = 0;
- std::ostringstream oss;
- // mark the structure as unaligned with '^', because numpy and C++ don't
- // always agree about alignment (particularly for complex), and we're
- // explicitly listing all our padding. This depends on none of the fields
- // overriding the endianness. Putting the ^ in front of individual fields
- // isn't guaranteed to work due to https://github.com/numpy/numpy/issues/9049
- oss << "^T{";
- for (auto& field : ordered_fields) {
- if (field.offset > offset)
- oss << (field.offset - offset) << 'x';
- oss << field.format << ':' << field.name << ':';
- offset = field.offset + field.size;
- }
- if (itemsize > offset)
- oss << (itemsize - offset) << 'x';
- oss << '}';
- auto format_str = oss.str();
- // Sanity check: verify that NumPy properly parses our buffer format string
- auto& api = npy_api::get();
- auto arr = array(buffer_info(nullptr, itemsize, format_str, 1));
- if (!api.PyArray_EquivTypes_(dtype_ptr, arr.dtype().ptr()))
- pybind11_fail("NumPy: invalid buffer descriptor!");
- auto tindex = std::type_index(tinfo);
- numpy_internals.registered_dtypes[tindex] = { dtype_ptr, format_str };
- get_internals().direct_conversions[tindex].push_back(direct_converter);
- }
- template <typename T, typename SFINAE> struct npy_format_descriptor {
- static_assert(is_pod_struct<T>::value, "Attempt to use a non-POD or unimplemented POD type as a numpy dtype");
- static constexpr auto name = make_caster<T>::name;
- static pybind11::dtype dtype() {
- return reinterpret_borrow<pybind11::dtype>(dtype_ptr());
- }
- static std::string format() {
- static auto format_str = get_numpy_internals().get_type_info<T>(true)->format_str;
- return format_str;
- }
- static void register_dtype(any_container<field_descriptor> fields) {
- register_structured_dtype(std::move(fields), typeid(typename std::remove_cv<T>::type),
- sizeof(T), &direct_converter);
- }
- private:
- static PyObject* dtype_ptr() {
- static PyObject* ptr = get_numpy_internals().get_type_info<T>(true)->dtype_ptr;
- return ptr;
- }
- static bool direct_converter(PyObject *obj, void*& value) {
- auto& api = npy_api::get();
- if (!PyObject_TypeCheck(obj, api.PyVoidArrType_Type_))
- return false;
- if (auto descr = reinterpret_steal<object>(api.PyArray_DescrFromScalar_(obj))) {
- if (api.PyArray_EquivTypes_(dtype_ptr(), descr.ptr())) {
- value = ((PyVoidScalarObject_Proxy *) obj)->obval;
- return true;
- }
- }
- return false;
- }
- };
- #ifdef __CLION_IDE__ // replace heavy macro with dummy code for the IDE (doesn't affect code)
- # define PYBIND11_NUMPY_DTYPE(Type, ...) ((void)0)
- # define PYBIND11_NUMPY_DTYPE_EX(Type, ...) ((void)0)
- #else
- #define PYBIND11_FIELD_DESCRIPTOR_EX(T, Field, Name) \
- ::pybind11::detail::field_descriptor { \
- Name, offsetof(T, Field), sizeof(decltype(std::declval<T>().Field)), \
- ::pybind11::format_descriptor<decltype(std::declval<T>().Field)>::format(), \
- ::pybind11::detail::npy_format_descriptor<decltype(std::declval<T>().Field)>::dtype() \
- }
- // Extract name, offset and format descriptor for a struct field
- #define PYBIND11_FIELD_DESCRIPTOR(T, Field) PYBIND11_FIELD_DESCRIPTOR_EX(T, Field, #Field)
- // The main idea of this macro is borrowed from https://github.com/swansontec/map-macro
- // (C) William Swanson, Paul Fultz
- #define PYBIND11_EVAL0(...) __VA_ARGS__
- #define PYBIND11_EVAL1(...) PYBIND11_EVAL0 (PYBIND11_EVAL0 (PYBIND11_EVAL0 (__VA_ARGS__)))
- #define PYBIND11_EVAL2(...) PYBIND11_EVAL1 (PYBIND11_EVAL1 (PYBIND11_EVAL1 (__VA_ARGS__)))
- #define PYBIND11_EVAL3(...) PYBIND11_EVAL2 (PYBIND11_EVAL2 (PYBIND11_EVAL2 (__VA_ARGS__)))
- #define PYBIND11_EVAL4(...) PYBIND11_EVAL3 (PYBIND11_EVAL3 (PYBIND11_EVAL3 (__VA_ARGS__)))
- #define PYBIND11_EVAL(...) PYBIND11_EVAL4 (PYBIND11_EVAL4 (PYBIND11_EVAL4 (__VA_ARGS__)))
- #define PYBIND11_MAP_END(...)
- #define PYBIND11_MAP_OUT
- #define PYBIND11_MAP_COMMA ,
- #define PYBIND11_MAP_GET_END() 0, PYBIND11_MAP_END
- #define PYBIND11_MAP_NEXT0(test, next, ...) next PYBIND11_MAP_OUT
- #define PYBIND11_MAP_NEXT1(test, next) PYBIND11_MAP_NEXT0 (test, next, 0)
- #define PYBIND11_MAP_NEXT(test, next) PYBIND11_MAP_NEXT1 (PYBIND11_MAP_GET_END test, next)
- #if defined(_MSC_VER) && !defined(__clang__) // MSVC is not as eager to expand macros, hence this workaround
- #define PYBIND11_MAP_LIST_NEXT1(test, next) \
- PYBIND11_EVAL0 (PYBIND11_MAP_NEXT0 (test, PYBIND11_MAP_COMMA next, 0))
- #else
- #define PYBIND11_MAP_LIST_NEXT1(test, next) \
- PYBIND11_MAP_NEXT0 (test, PYBIND11_MAP_COMMA next, 0)
- #endif
- #define PYBIND11_MAP_LIST_NEXT(test, next) \
- PYBIND11_MAP_LIST_NEXT1 (PYBIND11_MAP_GET_END test, next)
- #define PYBIND11_MAP_LIST0(f, t, x, peek, ...) \
- f(t, x) PYBIND11_MAP_LIST_NEXT (peek, PYBIND11_MAP_LIST1) (f, t, peek, __VA_ARGS__)
- #define PYBIND11_MAP_LIST1(f, t, x, peek, ...) \
- f(t, x) PYBIND11_MAP_LIST_NEXT (peek, PYBIND11_MAP_LIST0) (f, t, peek, __VA_ARGS__)
- // PYBIND11_MAP_LIST(f, t, a1, a2, ...) expands to f(t, a1), f(t, a2), ...
- #define PYBIND11_MAP_LIST(f, t, ...) \
- PYBIND11_EVAL (PYBIND11_MAP_LIST1 (f, t, __VA_ARGS__, (), 0))
- #define PYBIND11_NUMPY_DTYPE(Type, ...) \
- ::pybind11::detail::npy_format_descriptor<Type>::register_dtype \
- (::std::vector<::pybind11::detail::field_descriptor> \
- {PYBIND11_MAP_LIST (PYBIND11_FIELD_DESCRIPTOR, Type, __VA_ARGS__)})
- #if defined(_MSC_VER) && !defined(__clang__)
- #define PYBIND11_MAP2_LIST_NEXT1(test, next) \
- PYBIND11_EVAL0 (PYBIND11_MAP_NEXT0 (test, PYBIND11_MAP_COMMA next, 0))
- #else
- #define PYBIND11_MAP2_LIST_NEXT1(test, next) \
- PYBIND11_MAP_NEXT0 (test, PYBIND11_MAP_COMMA next, 0)
- #endif
- #define PYBIND11_MAP2_LIST_NEXT(test, next) \
- PYBIND11_MAP2_LIST_NEXT1 (PYBIND11_MAP_GET_END test, next)
- #define PYBIND11_MAP2_LIST0(f, t, x1, x2, peek, ...) \
- f(t, x1, x2) PYBIND11_MAP2_LIST_NEXT (peek, PYBIND11_MAP2_LIST1) (f, t, peek, __VA_ARGS__)
- #define PYBIND11_MAP2_LIST1(f, t, x1, x2, peek, ...) \
- f(t, x1, x2) PYBIND11_MAP2_LIST_NEXT (peek, PYBIND11_MAP2_LIST0) (f, t, peek, __VA_ARGS__)
- // PYBIND11_MAP2_LIST(f, t, a1, a2, ...) expands to f(t, a1, a2), f(t, a3, a4), ...
- #define PYBIND11_MAP2_LIST(f, t, ...) \
- PYBIND11_EVAL (PYBIND11_MAP2_LIST1 (f, t, __VA_ARGS__, (), 0))
- #define PYBIND11_NUMPY_DTYPE_EX(Type, ...) \
- ::pybind11::detail::npy_format_descriptor<Type>::register_dtype \
- (::std::vector<::pybind11::detail::field_descriptor> \
- {PYBIND11_MAP2_LIST (PYBIND11_FIELD_DESCRIPTOR_EX, Type, __VA_ARGS__)})
- #endif // __CLION_IDE__
- class common_iterator {
- public:
- using container_type = std::vector<ssize_t>;
- using value_type = container_type::value_type;
- using size_type = container_type::size_type;
- common_iterator() : p_ptr(0), m_strides() {}
- common_iterator(void* ptr, const container_type& strides, const container_type& shape)
- : p_ptr(reinterpret_cast<char*>(ptr)), m_strides(strides.size()) {
- m_strides.back() = static_cast<value_type>(strides.back());
- for (size_type i = m_strides.size() - 1; i != 0; --i) {
- size_type j = i - 1;
- auto s = static_cast<value_type>(shape[i]);
- m_strides[j] = strides[j] + m_strides[i] - strides[i] * s;
- }
- }
- void increment(size_type dim) {
- p_ptr += m_strides[dim];
- }
- void* data() const {
- return p_ptr;
- }
- private:
- char* p_ptr;
- container_type m_strides;
- };
- template <size_t N> class multi_array_iterator {
- public:
- using container_type = std::vector<ssize_t>;
- multi_array_iterator(const std::array<buffer_info, N> &buffers,
- const container_type &shape)
- : m_shape(shape.size()), m_index(shape.size(), 0),
- m_common_iterator() {
- // Manual copy to avoid conversion warning if using std::copy
- for (size_t i = 0; i < shape.size(); ++i)
- m_shape[i] = shape[i];
- container_type strides(shape.size());
- for (size_t i = 0; i < N; ++i)
- init_common_iterator(buffers[i], shape, m_common_iterator[i], strides);
- }
- multi_array_iterator& operator++() {
- for (size_t j = m_index.size(); j != 0; --j) {
- size_t i = j - 1;
- if (++m_index[i] != m_shape[i]) {
- increment_common_iterator(i);
- break;
- } else {
- m_index[i] = 0;
- }
- }
- return *this;
- }
- template <size_t K, class T = void> T* data() const {
- return reinterpret_cast<T*>(m_common_iterator[K].data());
- }
- private:
- using common_iter = common_iterator;
- void init_common_iterator(const buffer_info &buffer,
- const container_type &shape,
- common_iter &iterator,
- container_type &strides) {
- auto buffer_shape_iter = buffer.shape.rbegin();
- auto buffer_strides_iter = buffer.strides.rbegin();
- auto shape_iter = shape.rbegin();
- auto strides_iter = strides.rbegin();
- while (buffer_shape_iter != buffer.shape.rend()) {
- if (*shape_iter == *buffer_shape_iter)
- *strides_iter = *buffer_strides_iter;
- else
- *strides_iter = 0;
- ++buffer_shape_iter;
- ++buffer_strides_iter;
- ++shape_iter;
- ++strides_iter;
- }
- std::fill(strides_iter, strides.rend(), 0);
- iterator = common_iter(buffer.ptr, strides, shape);
- }
- void increment_common_iterator(size_t dim) {
- for (auto &iter : m_common_iterator)
- iter.increment(dim);
- }
- container_type m_shape;
- container_type m_index;
- std::array<common_iter, N> m_common_iterator;
- };
- enum class broadcast_trivial { non_trivial, c_trivial, f_trivial };
- // Populates the shape and number of dimensions for the set of buffers. Returns a broadcast_trivial
- // enum value indicating whether the broadcast is "trivial"--that is, has each buffer being either a
- // singleton or a full-size, C-contiguous (`c_trivial`) or Fortran-contiguous (`f_trivial`) storage
- // buffer; returns `non_trivial` otherwise.
- template <size_t N>
- broadcast_trivial broadcast(const std::array<buffer_info, N> &buffers, ssize_t &ndim, std::vector<ssize_t> &shape) {
- ndim = std::accumulate(buffers.begin(), buffers.end(), ssize_t(0), [](ssize_t res, const buffer_info &buf) {
- return std::max(res, buf.ndim);
- });
- shape.clear();
- shape.resize((size_t) ndim, 1);
- // Figure out the output size, and make sure all input arrays conform (i.e. are either size 1 or
- // the full size).
- for (size_t i = 0; i < N; ++i) {
- auto res_iter = shape.rbegin();
- auto end = buffers[i].shape.rend();
- for (auto shape_iter = buffers[i].shape.rbegin(); shape_iter != end; ++shape_iter, ++res_iter) {
- const auto &dim_size_in = *shape_iter;
- auto &dim_size_out = *res_iter;
- // Each input dimension can either be 1 or `n`, but `n` values must match across buffers
- if (dim_size_out == 1)
- dim_size_out = dim_size_in;
- else if (dim_size_in != 1 && dim_size_in != dim_size_out)
- pybind11_fail("pybind11::vectorize: incompatible size/dimension of inputs!");
- }
- }
- bool trivial_broadcast_c = true;
- bool trivial_broadcast_f = true;
- for (size_t i = 0; i < N && (trivial_broadcast_c || trivial_broadcast_f); ++i) {
- if (buffers[i].size == 1)
- continue;
- // Require the same number of dimensions:
- if (buffers[i].ndim != ndim)
- return broadcast_trivial::non_trivial;
- // Require all dimensions be full-size:
- if (!std::equal(buffers[i].shape.cbegin(), buffers[i].shape.cend(), shape.cbegin()))
- return broadcast_trivial::non_trivial;
- // Check for C contiguity (but only if previous inputs were also C contiguous)
- if (trivial_broadcast_c) {
- ssize_t expect_stride = buffers[i].itemsize;
- auto end = buffers[i].shape.crend();
- for (auto shape_iter = buffers[i].shape.crbegin(), stride_iter = buffers[i].strides.crbegin();
- trivial_broadcast_c && shape_iter != end; ++shape_iter, ++stride_iter) {
- if (expect_stride == *stride_iter)
- expect_stride *= *shape_iter;
- else
- trivial_broadcast_c = false;
- }
- }
- // Check for Fortran contiguity (if previous inputs were also F contiguous)
- if (trivial_broadcast_f) {
- ssize_t expect_stride = buffers[i].itemsize;
- auto end = buffers[i].shape.cend();
- for (auto shape_iter = buffers[i].shape.cbegin(), stride_iter = buffers[i].strides.cbegin();
- trivial_broadcast_f && shape_iter != end; ++shape_iter, ++stride_iter) {
- if (expect_stride == *stride_iter)
- expect_stride *= *shape_iter;
- else
- trivial_broadcast_f = false;
- }
- }
- }
- return
- trivial_broadcast_c ? broadcast_trivial::c_trivial :
- trivial_broadcast_f ? broadcast_trivial::f_trivial :
- broadcast_trivial::non_trivial;
- }
- template <typename T>
- struct vectorize_arg {
- static_assert(!std::is_rvalue_reference<T>::value, "Functions with rvalue reference arguments cannot be vectorized");
- // The wrapped function gets called with this type:
- using call_type = remove_reference_t<T>;
- // Is this a vectorized argument?
- static constexpr bool vectorize =
- satisfies_any_of<call_type, std::is_arithmetic, is_complex, is_pod>::value &&
- satisfies_none_of<call_type, std::is_pointer, std::is_array, is_std_array, std::is_enum>::value &&
- (!std::is_reference<T>::value ||
- (std::is_lvalue_reference<T>::value && std::is_const<call_type>::value));
- // Accept this type: an array for vectorized types, otherwise the type as-is:
- using type = conditional_t<vectorize, array_t<remove_cv_t<call_type>, array::forcecast>, T>;
- };
- // py::vectorize when a return type is present
- template <typename Func, typename Return, typename... Args>
- struct vectorize_returned_array {
- using Type = array_t<Return>;
- static Type create(broadcast_trivial trivial, const std::vector<ssize_t> &shape) {
- if (trivial == broadcast_trivial::f_trivial)
- return array_t<Return, array::f_style>(shape);
- else
- return array_t<Return>(shape);
- }
- static Return *mutable_data(Type &array) {
- return array.mutable_data();
- }
- static Return call(Func &f, Args &... args) {
- return f(args...);
- }
- static void call(Return *out, size_t i, Func &f, Args &... args) {
- out[i] = f(args...);
- }
- };
- // py::vectorize when a return type is not present
- template <typename Func, typename... Args>
- struct vectorize_returned_array<Func, void, Args...> {
- using Type = none;
- static Type create(broadcast_trivial, const std::vector<ssize_t> &) {
- return none();
- }
- static void *mutable_data(Type &) {
- return nullptr;
- }
- static detail::void_type call(Func &f, Args &... args) {
- f(args...);
- return {};
- }
- static void call(void *, size_t, Func &f, Args &... args) {
- f(args...);
- }
- };
- template <typename Func, typename Return, typename... Args>
- struct vectorize_helper {
- // NVCC for some reason breaks if NVectorized is private
- #ifdef __CUDACC__
- public:
- #else
- private:
- #endif
- static constexpr size_t N = sizeof...(Args);
- static constexpr size_t NVectorized = constexpr_sum(vectorize_arg<Args>::vectorize...);
- static_assert(NVectorized >= 1,
- "pybind11::vectorize(...) requires a function with at least one vectorizable argument");
- public:
- template <typename T>
- explicit vectorize_helper(T &&f) : f(std::forward<T>(f)) { }
- object operator()(typename vectorize_arg<Args>::type... args) {
- return run(args...,
- make_index_sequence<N>(),
- select_indices<vectorize_arg<Args>::vectorize...>(),
- make_index_sequence<NVectorized>());
- }
- private:
- remove_reference_t<Func> f;
- // Internal compiler error in MSVC 19.16.27025.1 (Visual Studio 2017 15.9.4), when compiling with "/permissive-" flag
- // when arg_call_types is manually inlined.
- using arg_call_types = std::tuple<typename vectorize_arg<Args>::call_type...>;
- template <size_t Index> using param_n_t = typename std::tuple_element<Index, arg_call_types>::type;
- using returned_array = vectorize_returned_array<Func, Return, Args...>;
- // Runs a vectorized function given arguments tuple and three index sequences:
- // - Index is the full set of 0 ... (N-1) argument indices;
- // - VIndex is the subset of argument indices with vectorized parameters, letting us access
- // vectorized arguments (anything not in this sequence is passed through)
- // - BIndex is a incremental sequence (beginning at 0) of the same size as VIndex, so that
- // we can store vectorized buffer_infos in an array (argument VIndex has its buffer at
- // index BIndex in the array).
- template <size_t... Index, size_t... VIndex, size_t... BIndex> object run(
- typename vectorize_arg<Args>::type &...args,
- index_sequence<Index...> i_seq, index_sequence<VIndex...> vi_seq, index_sequence<BIndex...> bi_seq) {
- // Pointers to values the function was called with; the vectorized ones set here will start
- // out as array_t<T> pointers, but they will be changed them to T pointers before we make
- // call the wrapped function. Non-vectorized pointers are left as-is.
- std::array<void *, N> params{{ &args... }};
- // The array of `buffer_info`s of vectorized arguments:
- std::array<buffer_info, NVectorized> buffers{{ reinterpret_cast<array *>(params[VIndex])->request()... }};
- /* Determine dimensions parameters of output array */
- ssize_t nd = 0;
- std::vector<ssize_t> shape(0);
- auto trivial = broadcast(buffers, nd, shape);
- auto ndim = (size_t) nd;
- size_t size = std::accumulate(shape.begin(), shape.end(), (size_t) 1, std::multiplies<size_t>());
- // If all arguments are 0-dimension arrays (i.e. single values) return a plain value (i.e.
- // not wrapped in an array).
- if (size == 1 && ndim == 0) {
- PYBIND11_EXPAND_SIDE_EFFECTS(params[VIndex] = buffers[BIndex].ptr);
- return cast(returned_array::call(f, *reinterpret_cast<param_n_t<Index> *>(params[Index])...));
- }
- auto result = returned_array::create(trivial, shape);
- if (size == 0) return std::move(result);
- /* Call the function */
- auto mutable_data = returned_array::mutable_data(result);
- if (trivial == broadcast_trivial::non_trivial)
- apply_broadcast(buffers, params, mutable_data, size, shape, i_seq, vi_seq, bi_seq);
- else
- apply_trivial(buffers, params, mutable_data, size, i_seq, vi_seq, bi_seq);
- return std::move(result);
- }
- template <size_t... Index, size_t... VIndex, size_t... BIndex>
- void apply_trivial(std::array<buffer_info, NVectorized> &buffers,
- std::array<void *, N> ¶ms,
- Return *out,
- size_t size,
- index_sequence<Index...>, index_sequence<VIndex...>, index_sequence<BIndex...>) {
- // Initialize an array of mutable byte references and sizes with references set to the
- // appropriate pointer in `params`; as we iterate, we'll increment each pointer by its size
- // (except for singletons, which get an increment of 0).
- std::array<std::pair<unsigned char *&, const size_t>, NVectorized> vecparams{{
- std::pair<unsigned char *&, const size_t>(
- reinterpret_cast<unsigned char *&>(params[VIndex] = buffers[BIndex].ptr),
- buffers[BIndex].size == 1 ? 0 : sizeof(param_n_t<VIndex>)
- )...
- }};
- for (size_t i = 0; i < size; ++i) {
- returned_array::call(out, i, f, *reinterpret_cast<param_n_t<Index> *>(params[Index])...);
- for (auto &x : vecparams) x.first += x.second;
- }
- }
- template <size_t... Index, size_t... VIndex, size_t... BIndex>
- void apply_broadcast(std::array<buffer_info, NVectorized> &buffers,
- std::array<void *, N> ¶ms,
- Return *out,
- size_t size,
- const std::vector<ssize_t> &output_shape,
- index_sequence<Index...>, index_sequence<VIndex...>, index_sequence<BIndex...>) {
- multi_array_iterator<NVectorized> input_iter(buffers, output_shape);
- for (size_t i = 0; i < size; ++i, ++input_iter) {
- PYBIND11_EXPAND_SIDE_EFFECTS((
- params[VIndex] = input_iter.template data<BIndex>()
- ));
- returned_array::call(out, i, f, *reinterpret_cast<param_n_t<Index> *>(std::get<Index>(params))...);
- }
- }
- };
- template <typename Func, typename Return, typename... Args>
- vectorize_helper<Func, Return, Args...>
- vectorize_extractor(const Func &f, Return (*) (Args ...)) {
- return detail::vectorize_helper<Func, Return, Args...>(f);
- }
- template <typename T, int Flags> struct handle_type_name<array_t<T, Flags>> {
- static constexpr auto name = _("numpy.ndarray[") + npy_format_descriptor<T>::name + _("]");
- };
- PYBIND11_NAMESPACE_END(detail)
- // Vanilla pointer vectorizer:
- template <typename Return, typename... Args>
- detail::vectorize_helper<Return (*)(Args...), Return, Args...>
- vectorize(Return (*f) (Args ...)) {
- return detail::vectorize_helper<Return (*)(Args...), Return, Args...>(f);
- }
- // lambda vectorizer:
- template <typename Func, detail::enable_if_t<detail::is_lambda<Func>::value, int> = 0>
- auto vectorize(Func &&f) -> decltype(
- detail::vectorize_extractor(std::forward<Func>(f), (detail::function_signature_t<Func> *) nullptr)) {
- return detail::vectorize_extractor(std::forward<Func>(f), (detail::function_signature_t<Func> *) nullptr);
- }
- // Vectorize a class method (non-const):
- template <typename Return, typename Class, typename... Args,
- typename Helper = detail::vectorize_helper<decltype(std::mem_fn(std::declval<Return (Class::*)(Args...)>())), Return, Class *, Args...>>
- Helper vectorize(Return (Class::*f)(Args...)) {
- return Helper(std::mem_fn(f));
- }
- // Vectorize a class method (const):
- template <typename Return, typename Class, typename... Args,
- typename Helper = detail::vectorize_helper<decltype(std::mem_fn(std::declval<Return (Class::*)(Args...) const>())), Return, const Class *, Args...>>
- Helper vectorize(Return (Class::*f)(Args...) const) {
- return Helper(std::mem_fn(f));
- }
- PYBIND11_NAMESPACE_END(PYBIND11_NAMESPACE)
- #if defined(_MSC_VER)
- #pragma warning(pop)
- #endif
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