three.js/examples/js/shaders/VolumeShader.js

/**
 * @author Almar Klein / http://almarklein.org
 *
 * Shaders to render 3D volumes using raycasting.
 * The applied techniques are based on similar implementations in the Visvis and Vispy projects.
 * This is not the only approach, therefore it's marked 1.
 */

THREE.VolumeRenderShader1 = {
	uniforms: {
        "u_size": { value: [1, 1, 1] },
        "u_renderstyle": { value: 0 },
        "u_renderthreshold": { value: 0.5 },
        "u_clim": { value: [0.0, 1.0] }
    },
    vertexShader: [
        'varying vec4 v_nearpos;',
        'varying vec4 v_farpos;',
        'varying vec3 v_position;',

        'mat4 inversemat(mat4 m) {',
            // Taken from https://github.com/stackgl/glsl-inverse/blob/master/index.glsl
            // This function is licenced by the MIT license to Mikola Lysenko
            'float',
            'a00 = m[0][0], a01 = m[0][1], a02 = m[0][2], a03 = m[0][3],',
            'a10 = m[1][0], a11 = m[1][1], a12 = m[1][2], a13 = m[1][3],',
            'a20 = m[2][0], a21 = m[2][1], a22 = m[2][2], a23 = m[2][3],',
            'a30 = m[3][0], a31 = m[3][1], a32 = m[3][2], a33 = m[3][3],',

            'b00 = a00 * a11 - a01 * a10,',
            'b01 = a00 * a12 - a02 * a10,',
            'b02 = a00 * a13 - a03 * a10,',
            'b03 = a01 * a12 - a02 * a11,',
            'b04 = a01 * a13 - a03 * a11,',
            'b05 = a02 * a13 - a03 * a12,',
            'b06 = a20 * a31 - a21 * a30,',
            'b07 = a20 * a32 - a22 * a30,',
            'b08 = a20 * a33 - a23 * a30,',
            'b09 = a21 * a32 - a22 * a31,',
            'b10 = a21 * a33 - a23 * a31,',
            'b11 = a22 * a33 - a23 * a32,',

            'det = b00 * b11 - b01 * b10 + b02 * b09 + b03 * b08 - b04 * b07 + b05 * b06;',

        'return mat4(',
            'a11 * b11 - a12 * b10 + a13 * b09,',
            'a02 * b10 - a01 * b11 - a03 * b09,',
            'a31 * b05 - a32 * b04 + a33 * b03,',
            'a22 * b04 - a21 * b05 - a23 * b03,',
            'a12 * b08 - a10 * b11 - a13 * b07,',
            'a00 * b11 - a02 * b08 + a03 * b07,',
            'a32 * b02 - a30 * b05 - a33 * b01,',
            'a20 * b05 - a22 * b02 + a23 * b01,',
            'a10 * b10 - a11 * b08 + a13 * b06,',
            'a01 * b08 - a00 * b10 - a03 * b06,',
            'a30 * b04 - a31 * b02 + a33 * b00,',
            'a21 * b02 - a20 * b04 - a23 * b00,',
            'a11 * b07 - a10 * b09 - a12 * b06,',
            'a00 * b09 - a01 * b07 + a02 * b06,',
            'a31 * b01 - a30 * b03 - a32 * b00,',
            'a20 * b03 - a21 * b01 + a22 * b00) / det;',
        '}',


        'void main() {',
            // Prepare transforms to map to "camera view". See also:
            // https://threejs.org/docs/#api/renderers/webgl/WebGLProgram
            'mat4 viewtransformf = viewMatrix;',
            'mat4 viewtransformi = inversemat(viewMatrix);',

            // Project local vertex coordinate to camera position. Then do a step
            // backward (in cam coords) to the near clipping plane, and project back. Do
            // the same for the far clipping plane. This gives us all the information we
            // need to calculate the ray and truncate it to the viewing cone.
            'vec4 position4 = vec4(position, 1.0);',
            'vec4 pos_in_cam = viewtransformf * position4;',

            // Intersection of ray and near clipping plane (z = -1 in clip coords)
            'pos_in_cam.z = -pos_in_cam.w;',
            'v_nearpos = viewtransformi * pos_in_cam;',

            // Intersection of ray and far clipping plane (z = +1 in clip coords)
            'pos_in_cam.z = pos_in_cam.w;',
            'v_farpos = viewtransformi * pos_in_cam;',

            // Set varyings and output pos
            'v_position = position;',
            'gl_Position = projectionMatrix * viewMatrix * modelMatrix * position4;',
        '}',
    ].join( '\n' ),
	fragmentShader: [
        'precision highp float;',
        'precision mediump sampler3D;',

        'uniform vec3 u_size;',
        'uniform int u_renderstyle;',
        'uniform float u_renderthreshold;',
        'uniform vec2 u_clim;',

        'uniform sampler3D u_data;',
        'uniform sampler2D u_cmdata;',

        'varying vec3 v_position;',
        'varying vec4 v_nearpos;',
        'varying vec4 v_farpos;',

        // The maximum distance through our rendering volume is sqrt(3).
        'const int MAX_STEPS = 887;  // 887 for 512^3, 1774 for 1024^3',
        'const int REFINEMENT_STEPS = 4;',
        'const float relative_step_size = 1.0;',
        'const vec4 ambient_color = vec4(0.2, 0.4, 0.2, 1.0);',
        'const vec4 diffuse_color = vec4(0.8, 0.2, 0.2, 1.0);',
        'const vec4 specular_color = vec4(1.0, 1.0, 1.0, 1.0);',
        'const float shininess = 40.0;',

        'void cast_mip(vec3 start_loc, vec3 step, int nsteps, vec3 view_ray);',
        'void cast_iso(vec3 start_loc, vec3 step, int nsteps, vec3 view_ray);',

        'float sample1(vec3 texcoords);',
        'vec4 apply_colormap(float val);',
        'vec4 add_lighting(float val, vec3 loc, vec3 step, vec3 view_ray);',


        'void main() {',
            // Normalize clipping plane info
            'vec3 farpos = v_farpos.xyz / v_farpos.w;',
            'vec3 nearpos = v_nearpos.xyz / v_nearpos.w;',

            // Calculate unit vector pointing in the view direction through this fragment.
            'vec3 view_ray = normalize(nearpos.xyz - farpos.xyz);',

            // Compute the (negative) distance to the front surface or near clipping plane.
            // v_position is the back face of the cuboid, so the initial distance calculated in the dot
            // product below is the distance from near clip plane to the back of the cuboid
            'float distance = dot(nearpos - v_position, view_ray);',
            'distance = max(distance, min((-0.5 - v_position.x) / view_ray.x,',
                                        '(u_size.x - 0.5 - v_position.x) / view_ray.x));',
            'distance = max(distance, min((-0.5 - v_position.y) / view_ray.y,',
                                        '(u_size.y - 0.5 - v_position.y) / view_ray.y));',
            'distance = max(distance, min((-0.5 - v_position.z) / view_ray.z,',
                                        '(u_size.z - 0.5 - v_position.z) / view_ray.z));',

                                        // Now we have the starting position on the front surface
            'vec3 front = v_position + view_ray * distance;',

            // Decide how many steps to take
            'int nsteps = int(-distance / relative_step_size + 0.5);',
            'if ( nsteps < 1 )',
                'discard;',

            // Get starting location and step vector in texture coordinates
            'vec3 step = ((v_position - front) / u_size) / float(nsteps);',
            'vec3 start_loc = front / u_size;',

            // For testing: show the number of steps. This helps to establish
            // whether the rays are correctly oriented
            //'gl_FragColor = vec4(0.0, float(nsteps) / 1.0 / u_size.x, 1.0, 1.0);',
            //'return;',

            'if (u_renderstyle == 0)',
                'cast_mip(start_loc, step, nsteps, view_ray);',
            'else if (u_renderstyle == 1)',
                'cast_iso(start_loc, step, nsteps, view_ray);',

            'if (gl_FragColor.a < 0.05)',
                'discard;',
        '}',


        'float sample1(vec3 texcoords) {',
            '/* Sample float value from a 3D texture. Assumes intensity data. */',
            'return texture(u_data, texcoords.xyz).r;',
        '}',


        'vec4 apply_colormap(float val) {',
            'val = (val - u_clim[0]) / (u_clim[1] - u_clim[0]);',
            'return texture2D(u_cmdata, vec2(val, 0.5));',
        '}',


        'void cast_mip(vec3 start_loc, vec3 step, int nsteps, vec3 view_ray) {',

            'float max_val = -1e6;',
            'int max_i = 100;',
            'vec3 loc = start_loc;',

            // Enter the raycasting loop. In WebGL 1 the loop index cannot be compared with
            // non-constant expression. So we use a hard-coded max, and an additional condition
            // inside the loop.
            'for (int iter=0; iter<MAX_STEPS; iter++) {',
                'if (iter >= nsteps)',
                    'break;',
                // Sample from the 3D texture
                'float val = sample1(loc);',
                // Apply MIP operation
                'if (val > max_val) {',
                    'max_val = val;',
                    'max_i = iter;',
                '}',
                // Advance location deeper into the volume
                'loc += step;',
            '}',

            // Refine location, gives crispier images
            'vec3 iloc = start_loc + step * (float(max_i) - 0.5);',
            'vec3 istep = step / float(REFINEMENT_STEPS);',
            'for (int i=0; i<REFINEMENT_STEPS; i++) {',
                'max_val = max(max_val, sample1(iloc));',
                'iloc += istep;',
            '}',

            // Resolve final color
            'gl_FragColor = apply_colormap(max_val);',
        '}',


        'void cast_iso(vec3 start_loc, vec3 step, int nsteps, vec3 view_ray) {',

            'gl_FragColor = vec4(0.0);  // init transparent',
            'vec4 color3 = vec4(0.0);  // final color',
            'vec3 dstep = 1.5 / u_size;  // step to sample derivative',
            'vec3 loc = start_loc;',

            'float low_threshold = u_renderthreshold - 0.02 * (u_clim[1] - u_clim[0]);',

            // Enter the raycasting loop. In WebGL 1 the loop index cannot be compared with
            // non-constant expression. So we use a hard-coded max, and an additional condition
            // inside the loop.
            'for (int iter=0; iter<MAX_STEPS; iter++) {',
                'if (iter >= nsteps)',
                    'break;',

                    // Sample from the 3D texture
                'float val = sample1(loc);',

                'if (val > low_threshold) {',
                // Take the last interval in smaller steps
                    'vec3 iloc = loc - 0.5 * step;',
                    'vec3 istep = step / float(REFINEMENT_STEPS);',
                    'for (int i=0; i<REFINEMENT_STEPS; i++) {',
                        'val = sample1(iloc);',
                        'if (val > u_renderthreshold) {',
                            'gl_FragColor = add_lighting(val, iloc, dstep, view_ray);',
                            'return;',
                        '}',
                        'iloc += istep;',
                    '}',
                '}',

                // Advance location deeper into the volume
                'loc += step;',
            '}',
        '}',


        'vec4 add_lighting(float val, vec3 loc, vec3 step, vec3 view_ray)',
        '{',
            // Calculate color by incorporating lighting

            // View direction
            'vec3 V = normalize(view_ray);',

            // calculate normal vector from gradient
            'vec3 N;',
            'float val1, val2;',
            'val1 = sample1(loc + vec3(-step[0], 0.0, 0.0));',
            'val2 = sample1(loc + vec3(+step[0], 0.0, 0.0));',
            'N[0] = val1 - val2;',
            'val = max(max(val1, val2), val);',
            'val1 = sample1(loc + vec3(0.0, -step[1], 0.0));',
            'val2 = sample1(loc + vec3(0.0, +step[1], 0.0));',
            'N[1] = val1 - val2;',
            'val = max(max(val1, val2), val);',
            'val1 = sample1(loc + vec3(0.0, 0.0, -step[2]));',
            'val2 = sample1(loc + vec3(0.0, 0.0, +step[2]));',
            'N[2] = val1 - val2;',
            'val = max(max(val1, val2), val);',

            'float gm = length(N); // gradient magnitude',
            'N = normalize(N);',

            // Flip normal so it points towards viewer
            'float Nselect = float(dot(N, V) > 0.0);',
            'N = (2.0 * Nselect - 1.0) * N;  // ==  Nselect * N - (1.0-Nselect)*N;',

            // Init colors
            'vec4 ambient_color = vec4(0.0, 0.0, 0.0, 0.0);',
            'vec4 diffuse_color = vec4(0.0, 0.0, 0.0, 0.0);',
            'vec4 specular_color = vec4(0.0, 0.0, 0.0, 0.0);',

            // note: could allow multiple lights
            'for (int i=0; i<1; i++)',
            '{',
                 // Get light direction (make sure to prevent zero devision)
                'vec3 L = normalize(view_ray);  //lightDirs[i];',
                'float lightEnabled = float( length(L) > 0.0 );',
                'L = normalize(L + (1.0 - lightEnabled));',

                // Calculate lighting properties
                'float lambertTerm = clamp(dot(N, L), 0.0, 1.0);',
                'vec3 H = normalize(L+V); // Halfway vector',
                'float specularTerm = pow(max(dot(H, N), 0.0), shininess);',

                // Calculate mask
                'float mask1 = lightEnabled;',

                // Calculate colors
                'ambient_color +=  mask1 * ambient_color;  // * gl_LightSource[i].ambient;',
                'diffuse_color +=  mask1 * lambertTerm;',
                'specular_color += mask1 * specularTerm * specular_color;',
            '}',

            // Calculate final color by componing different components
            'vec4 final_color;',
            'vec4 color = apply_colormap(val);',
            'final_color = color * (ambient_color + diffuse_color) + specular_color;',
            'final_color.a = color.a;',
            'return final_color;',
        '}',
	].join( '\n' )
};