webgl_loader_pdb.html 5.7 KB

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  1. <!DOCTYPE html>
  2. <html>
  3. <head>
  4. <meta charset="utf-8">
  5. <meta name="viewport" content="width=device-width, user-scalable=no, minimum-scale=1.0, maximum-scale=1.0">
  6. <title>three.js webgl - molecules</title>
  7. <style>
  8. body {
  9. margin: 0;
  10. font-family: Arial;
  11. overflow: hidden;
  12. }
  13. a {
  14. color: #ffffff;
  15. }
  16. #info {
  17. position: absolute;
  18. top: 0px;
  19. width: 100%;
  20. color: #ffffff;
  21. padding: 5px;
  22. font-family: Monospace;
  23. font-size: 13px;
  24. font-weight: bold;
  25. text-align: center;
  26. z-index: 1;
  27. }
  28. #menu {
  29. position: absolute;
  30. bottom: 20px;
  31. width: 100%;
  32. text-align: center;
  33. padding: 0;
  34. margin: 0;
  35. }
  36. button {
  37. color: rgb(255,255,255);
  38. background: transparent;
  39. border: 0px;
  40. padding: 5px 10px;
  41. cursor: pointer;
  42. }
  43. button:hover {
  44. background-color: rgba(0,255,255,0.5);
  45. }
  46. button:active {
  47. color: #000000;
  48. background-color: rgba(0,255,255,1);
  49. }
  50. .bond {
  51. width: 5px;
  52. height: 10px;
  53. background: #eee;
  54. display: block;
  55. }
  56. </style>
  57. </head>
  58. <body>
  59. <script src="../build/three.min.js"></script>
  60. <script src="js/controls/TrackballControls.js"></script>
  61. <script src="js/loaders/PDBLoader.js"></script>
  62. <div id="container"></div>
  63. <div id="info"><a href="http://threejs.org" target="_blank">three.js webgl</a> - molecules</div>
  64. <div id="menu"></div>
  65. <script>
  66. var camera, scene, renderer;
  67. var controls;
  68. var root;
  69. var MOLECULES = {
  70. "Ethanol": "ethanol.pdb",
  71. "Aspirin": "aspirin.pdb",
  72. "Caffeine": "caffeine.pdb",
  73. "Nicotine": "nicotine.pdb",
  74. "LSD": "lsd.pdb",
  75. "Cocaine": "cocaine.pdb",
  76. "Cholesterol": "cholesterol.pdb",
  77. "Lycopene": "lycopene.pdb",
  78. "Glucose": "glucose.pdb",
  79. "Aluminium oxide": "Al2O3.pdb",
  80. "Cubane": "cubane.pdb",
  81. "Copper": "cu.pdb",
  82. "Fluorite": "caf2.pdb",
  83. "Salt": "nacl.pdb",
  84. "YBCO superconductor": "ybco.pdb",
  85. "Buckyball": "buckyball.pdb",
  86. //"Diamond": "diamond.pdb",
  87. "Graphite": "graphite.pdb"
  88. };
  89. var loader = new THREE.PDBLoader();
  90. var colorSpriteMap = {};
  91. var baseSprite = document.createElement( 'img' );
  92. var menu = document.getElementById( "menu" );
  93. init();
  94. animate();
  95. function init() {
  96. camera = new THREE.PerspectiveCamera( 70, window.innerWidth / window.innerHeight, 1, 5000 );
  97. camera.position.z = 1500;
  98. scene = new THREE.Scene();
  99. var light = new THREE.HemisphereLight( 0xffffff, 0x000000 );
  100. light.position.set( 1, 1, 1 );
  101. scene.add( light );
  102. root = new THREE.Object3D();
  103. scene.add( root );
  104. //
  105. renderer = new THREE.WebGLRenderer( { antialias: true } );
  106. renderer.setClearColor( 0x050505 );
  107. renderer.setSize( window.innerWidth, window.innerHeight );
  108. document.getElementById( 'container' ).appendChild( renderer.domElement );
  109. //
  110. controls = new THREE.TrackballControls( camera, renderer.domElement );
  111. controls.rotateSpeed = 0.5;
  112. controls.addEventListener( 'change', render );
  113. //
  114. baseSprite.onload = function () {
  115. loadMolecule( "models/molecules/caffeine.pdb" );
  116. createMenu();
  117. };
  118. baseSprite.src = 'textures/sprites/ball.png';
  119. //
  120. window.addEventListener( 'resize', onWindowResize, false );
  121. }
  122. //
  123. function generateButtonCallback( url ) {
  124. return function ( event ) {
  125. loadMolecule( url );
  126. }
  127. }
  128. function createMenu() {
  129. for ( var m in MOLECULES ) {
  130. var button = document.createElement( 'button' );
  131. button.innerHTML = m;
  132. menu.appendChild( button );
  133. var url = "models/molecules/" + MOLECULES[ m ];
  134. button.addEventListener( 'click', generateButtonCallback( url ), false );
  135. }
  136. }
  137. //
  138. function loadMolecule( url ) {
  139. while( root.children.length > 0 ) {
  140. var object = root.children[ 0 ];
  141. object.parent.remove( object );
  142. }
  143. loader.load( url, function ( geometry, geometryBonds ) {
  144. var boxGeometry = new THREE.BoxGeometry( 1, 1, 1 );
  145. var sphereGeometry = new THREE.IcosahedronGeometry( 1, 2 );
  146. var offset = THREE.GeometryUtils.center( geometry );
  147. geometryBonds.applyMatrix( new THREE.Matrix4().makeTranslation( offset.x, offset.y, offset.z ) );
  148. for ( var i = 0; i < geometry.vertices.length; i ++ ) {
  149. var position = geometry.vertices[ i ];
  150. var color = geometry.colors[ i ];
  151. var element = geometry.elements[ i ];
  152. var material = new THREE.MeshLambertMaterial( { color: color } );
  153. var object = new THREE.Mesh( sphereGeometry, material );
  154. object.position.copy( position );
  155. object.position.multiplyScalar( 75 );
  156. object.scale.multiplyScalar( 25 );
  157. root.add( object );
  158. }
  159. for ( var i = 0; i < geometryBonds.vertices.length; i += 2 ) {
  160. var start = geometryBonds.vertices[ i ];
  161. var end = geometryBonds.vertices[ i + 1 ];
  162. start.multiplyScalar( 75 );
  163. end.multiplyScalar( 75 );
  164. var object = new THREE.Mesh( boxGeometry, new THREE.MeshLambertMaterial( 0xffffff ) );
  165. object.position.copy( start );
  166. object.position.lerp( end, 0.5 );
  167. object.scale.set( 5, 5, start.distanceTo( end ) );
  168. object.lookAt( end );
  169. root.add( object );
  170. }
  171. render();
  172. } );
  173. }
  174. //
  175. function onWindowResize() {
  176. camera.aspect = window.innerWidth / window.innerHeight;
  177. camera.updateProjectionMatrix();
  178. renderer.setSize( window.innerWidth, window.innerHeight );
  179. render();
  180. }
  181. function animate() {
  182. requestAnimationFrame( animate );
  183. controls.update();
  184. var time = Date.now() * 0.0004;
  185. root.rotation.x = time;
  186. root.rotation.y = time * 0.7;
  187. render();
  188. }
  189. function render() {
  190. renderer.render( scene, camera );
  191. }
  192. </script>
  193. </body>
  194. </html>